HENRY the Human Evolution News Relay

13Oct/09Off

Tree tuesday: The global human mitochondrial tree

mitomap

This is a picture of the global human mitochondrial tree from mitomap.org. The full-sized image is here (large!).

16Dec/08Off

Tree Tuesday: The Computer Tree

The Computer Tree

(Thanks Fiona!)

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25Jul/08Off

Dinosaurs, Supertrees, and the Cretaceous Terrestrial Revolution

Today's PRS.B sees the publication of a supertree of 600 Dinosaur species. Awesome. ScienceDaily has more information here. Here's a picture of it (note: a full version is available here):

Dinosaur Supertree

The abstract says:

The observed diversity of dinosaurs reached its highest peak during the mid- and Late Cretaceous, the 50Myr that preceded their extinction, and yet this explosion of dinosaur diversity may be explained largely by sampling bias. It has long been debated whether dinosaurs were part of the Cretaceous Terrestrial Revolution (KTR), from 125–80Myr ago, when flowering plants, herbivorous and social insects, squamates, birds and mammals all underwent a rapid expansion.

Although an apparent explosion of dinosaur diversity occurred in the mid-Cretaceous, coinciding with the emergence of new groups (e.g. neoceratopsians, ankylosaurid ankylosaurs, hadrosaurids and pachycephalosaurs), results from the first quantitative study of diversification applied to a new supertree of dinosaurs show that this apparent burst in dinosaurian diversity in the last 18 Myr of the Cretaceous is a sampling artefact. Indeed, major diversification shifts occurred largely in the first one-third of the group's history.

Despite the appearance of new clades of medium to large herbivores and carnivores later in dinosaur history, these new originations do not correspond to significant diversification shifts. Instead, the overall geometry of the Cretaceous part of the dinosaur tree does not depart from the null hypothesis of an equal rates model of lineage branching. Furthermore, we conclude that dinosaurs did not experience a progressive decline at the end of the Cretaceous, nor was their evolution driven directly by the KTR

27May/08Off

Tree Tuesday: The Affinities of Jaffa Cakes

Shown here is the phylogeny of biscuits (or maybe the cladogram of cookies). From the ground-breaking work of Smith (2005) The Affinities of Jaffa Cakes: Using Cladistics to Classify Biscuits. Note the controversial basal subgrouping of the pseudobiscuits clade.

Edit: I wasn't particularly convinced by the treelike-ness of these biscuitoids, so I threw the data into a NeighborNet and was shocked and mildly nauseated to see the amount of conflicting signal there:

This usually indicates conflicting signal, in this case probably horizontal transfer (cross breeding) between the biscuits. In particular, the Partidae (Pinkwafer, Minigems and Partyring) appear to have a lot of traits in common with the Angulars sub-clade of the True Biscuits AND with Rounds. Yuck.

13May/08Off

Tree Tuesday: Klimt’s tree of life

Stoclet-Fries: Lebensbaum (Werkvorlage), (1905/09) by Gustav Klimt. (Full image)

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29Apr/08Off

Tree Tuesday: The evolution of nervousness

(More on American Nervousness, thanks Fiona!)

22Apr/08Off

Tree tuesday: Sabica, Wernham 1914

Phylogeny of Sabicea (Angiosperm) with American subspecies encircled. From Wernham (1914) and Lam (1936).

Wernham, H.F. (1914). A monograph of the genus Sabicea. London: British Museum of Natural History.
Lam, H.J. (1936) Phylogenetic symbols, past and present: Being an apology for genealogical trees. Acta Biotheoretica, 2:153-194.

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