HENRY the Human Evolution News Relay

26Nov/09Off

The Endangered Languages Armamentation Programme

One way to help protect dying languages - SpecGram—Call For Proposals—The Endangered Languages Armamentation Programme:

It is well known that a “language” is just a dialect with an army. Furthermore, it is well-known that endangered languages today are endangered because they are being replaced by encroaching majority languages.

The Endangered Languages Armamentation Programme recognizes these facts, and aims to provide the means for minority speech communities to attain the status of “languages,” while simultaneously providing for their active defence against the encroachment of their majority language neighbors.

24Nov/09Off

Tuberculosis in Dr Granville’s mummy

Tuberculosis in Dr Granville's mummy: a molecular re-examination of the earliest known Egyptian mummy to be scientifically examined and given a medical diagnosis:

‘Dr Granville's mummy’ was described to the Royal Society of London in 1825 and was the first ancient Egyptian mummy to be subjected to a scientific autopsy. The remains are those of a woman, Irtyersenu, aged about 50, from the necropolis of Thebes and dated to about 600 BC. Augustus Bozzi Granville (1783–1872), an eminent physician and obstetrician, described many organs still in situ and attributed the cause of death to a tumour of the ovary.

However, subsequent histological investigations indicate that the tumour is a benign cystadenoma. Histology of the lungs demonstrated a potentially fatal pulmonary exudate and earlier studies attempted to associate this with particular disease conditions. Palaeopathology and ancient DNA analyses show that tuberculosis was widespread in ancient Egypt, so a systematic search for tuberculosis was made, using specific DNA and lipid biomarker analyses.

Clear evidence for Mycobacterium tuberculosis complex DNA was obtained in lung tissue and gall bladder samples, based on nested PCR of the IS6110 locus. Lung and femurs were positive for specific M. tuberculosis complex cell-wall mycolic acids, demonstrated by high-performance liquid chromatography of pyrenebutyric acid–pentafluorobenzyl mycolates. Therefore, tuberculosis is likely to have been the major cause of death of Irtyersenu.

11Nov/09Off

Universal motifs in color naming

World Color Survey color naming reveals universal motifs and their within-language diversity:

We analyzed the color terms in the World Color Survey (WCS), a large color-naming database obtained from informants of mostly unwritten languages spoken in preindustrialized cultures that have had limited contact with modern, industrialized society. The color naming idiolects of 2,367 WCS informants fall into three to six “motifs,” where each motif is a different color-naming system based on a subset of a universal glossary of 11 color terms. These motifs are universal in that they occur worldwide, with some individual variation, in completely unrelated languages.

Strikingly, these few motifs are distributed across the WCS informants in such a way that multiple motifs occur in most languages. Thus, the culture a speaker comes from does not completely determine how he or she will use color terms. An analysis of the modern patterns of motif usage in the WCS languages, based on the assumption that they reflect historical patterns of color term evolution, suggests that color lexicons have changed over time in a complex but orderly way.

The worldwide distribution of the motifs and the cooccurrence of multiple motifs within languages suggest that universal processes control the naming of colors.

11Nov/09Off

A Single Origin for Dogs South of Yangtze River

An interesting paper on the origin of dogs in the forthcoming issue of Molecular Biology and Evolution - mtDNA Data Indicate a Single Origin for Dogs South of Yangtze River, Less Than 16,300 Years Ago, from Numerous Wolves:

There is no generally accepted picture of where, when, and how the domestic dog originated. Previous studies of mitochondrial DNA mtDNA have failed to establish the time and precise place of origin because of lack of phylogenetic resolution in the so far studied control region CR, and inadequate sampling. We therefore analyzed entire mitochondrial genomes for 169 dogs to obtain maximal phylogenetic resolution and the CR for 1,543 dogs across the Old World for a comprehensive picture of geographical diversity.

Hereby, a detailed picture of the origins of the dog can for the first time be suggested. We obtained evidence that the dog has a single origin in time and space and an estimation of the time of origin, number of founders, and approximate region, which also gives potential clues about the human culture involved. The analyses showed that dogs universally share a common homogenous gene pool containing 10 major haplogroups.

However, the full range of genetic diversity, all 10 haplogroups, was found only in southeastern Asia south of Yangtze River, and diversity decreased following a gradient across Eurasia, through seven haplogroups in Central China and five in North China and Southwest SWAsia, down to only four haplogroups in Europe.

The mean sequence distance to ancestral haplotypes indicates an origin 5,400–16,300 years ago ya from at least 51 female wolf founders. These results indicate that the domestic dog originated in southern China less than 16,300 ya, from several hundred wolves.

The place and time coincide approximately with the origin of rice agriculture, suggesting that the dogs may have originated among sedentary hunter-gatherers or early farmers, and the numerous founders indicate that wolf taming was an important culture trait.

11Nov/09Off

Predicting the direction of ornament evolution in guppies

Predicting the direction of ornament evolution in Trinidadian guppies Poecilia reticulata:

Sexual selection is thought to be opposed by natural selection such that ornamental traits express a balance between these two antagonistic influences. Phenotypic variation among populations may indicate local shifts in this balance, or that different stable ‘solutions’ are possible, but testing these alternatives presents a major challenge. In the guppy Poecilia reticulata, a small freshwater fish with male-limited ornamental coloration, these issues can be addressed by transplanting fish among sites of varying predation pressure, thus effectively manipulating the strength and nature of natural selection.

Here, we contrast the evolutionary outcome of two such introductions conducted in the Trinidadian El Cedro and Aripo Rivers. We use sophisticated colour appraisal methods that account for full spectrum colour variation and which incorporate the very latest visual sensitivity data for guppies and their predators.

Our data indicate that ornamentation evolved along different trajectories: whereas Aripo males evolved more numerous and/or larger orange, black and iridescent markings, El Cedro males only evolved more extensive and brighter iridescence. Examination of the El Cedro experiment also revealed little or no ornamental evolution at the control site over 29 years, which contrasts markedly with the rapid approx. 2–3 years changes reported for introduction populations.

Finally, whole colour-pattern analysis suggested that the greatest visual difference between El Cedro introduction and control fish would be perceived by the two most salient viewers: guppies and the putatively dangerous predator Crenicichla alta. We discuss whether and how these evolutionary trajectories may result from founder effects, population-specific mate preferences and/or sensory drive.

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5Nov/09Off

The independent innovation of lego lexicon

“Can you see any clippy bits?” my son asked his friend. The friend was flummoxed. “Do you mean handy bits?” he asked, pointing.

“Yes,” replied my boy. “Clippy bits.”

Of course! This language of Lego isn’t just something our family has invented; every Lego-building family must have its own vocabulary. And the words they use (mostly invented by the children, not the adults) are likely to be different every time. But how different? And what sort of words?

A Common Nomenclature for Lego Families by Giles Turnbull.

Filed under: linguistics No Comments
20Oct/09Off

Apocalypse Soon. Is the world really going to end in 2012?

We live in a techno-immersed, materially oriented society that seems somewhat bewildered by where rational, empirical science might be taking us. This may be why the mystical, escapist explanations of a galactic endpoint, replete with precise mathematical, historical, and cosmic underpinnings (masquerading as science), have such wide appeal. In an age of anxiety we reach for the wisdom of ancestors--even other peoples' ancestors--that might have been lost in the drifting sands of time. Perhaps the only way we can take back control of our disordered world is to rediscover their lost knowledge and make use of it. And so we romanticize the ancient Maya.

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