Tree Tuesday: The Affinities of Jaffa Cakes

Shown here is the phylogeny of biscuits (or maybe the cladogram of cookies). From the ground-breaking work of Smith (2005) The Affinities of Jaffa Cakes: Using Cladistics to Classify Biscuits. Note the controversial basal subgrouping of the pseudobiscuits clade.
Edit: I wasn’t particularly convinced by the treelike-ness of these biscuitoids, so I threw the data into a NeighborNet and was shocked and mildly nauseated to see the amount of conflicting signal there:

This usually indicates conflicting signal, in this case probably horizontal transfer (cross breeding) between the biscuits. In particular, the Partidae (Pinkwafer, Minigems and Partyring) appear to have a lot of traits in common with the Angulars sub-clade of the True Biscuits AND with Rounds. Yuck.
Posted on
May 27th, 2008 by
Simon Greenhill
One Response to “Tree Tuesday: The Affinities of Jaffa Cakes”
Leave a Reply
Categories
- africa
- americas
- anthropology
- art
- austronesian
- bacteria
- bees
- birds
- bongo-bongoism
- books
- chimpanzees
- conferences
- creationism-is-stupid
- cultural evolution
- culture
- dinosaurs
- disease
- europe
- evolution
- Evolutionary Psychology
- fossils
- genetics
- henry
- horizontal gene transfer
- human prehistory
- humor
- it-was-better-in-my-day
- language
- language preservation
- linguistics
- literature
- microsatellites
- misc
- mtDNA
- music
- neanderthals
- neuroscience
- new-caledonian-crows
- non-human
- ook!
- orangutans
- papers-I-should-read
- people
- phylogenetics
- polynesia
- primates
- psychology
- punctuated equilibrium
- quotes
- religion
- science
- self-improvement
- sexual selection
- six-degrees
- software
- SSTA
- stupidity
- tool-use
- Tree Tuesday
- Uncategorized
- websites
- wednesday-wiki
- Y chromosome
Related Sites
- Anthropology.net
- bayblab
- Computational Biology and Evolution
- Culture evolves!
- Dechronization
- Expelled
- Genomicron
- iPhylo
- John Hawks
- language.psy.auckland.ac.nz
- Of Two Minds
- Primatology.net
- Quentin Atkinson
- simon.net.nz

May 29th, 2008 at 3:00 am
Hahahaha, you saved me from doing the same thing. Given that these are all British biscuits, I think really that we need to have the Antipodean bikky phyla represented, not to mention the North American Cookies! All I could think of was MMM TIMTAMS.